Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2184: 10552 - Hypothetical Protein, at 286236 to 287917 10552 mRNA_2185: 10553 - HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879, at 288686 to 288844 10553 mRNA_2186: 10554 - K06316 RFT1 oligosaccharide translocation protein RFT1, at 289914 to 291585 10554 mRNA_2187: 10555 - K09602 OTUB1 ubiquitin thioesterase protein OTUB1, at 291957 to 293217 10555 mRNA_2188: 10556 - Hypothetical Protein, at 294159 to 294788 10556
Group Condition mRNA_2184 mRNA_2185 mRNA_2186 mRNA_2187 mRNA_2188
10552
10553
10554
10555
10556
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -1.0   -0.4  
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.8   -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.8   0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.4   0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.8   -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.4   -0.3  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.5   0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.3   -0.3  
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.6   0.3  
ypd buoyancy 40 hrs Low Buoyancy -0.6 0.3   -0.1  
growth on ricinoleic acid YNB Glucose 0.1 -0.3   0.4  
growth on oleic acid YNB Oleic Acid 0.0 0.6   -0.2  
growth on ypd YPD 0.1 0.8   -0.3  
growth on oleic acid YNB Glucose -0.1 0.8   -0.1  
auxotrophy YNB Glucose 75mM Arginine -0.4 1.7   -0.4  
auxotrophy YNB Glucose 75mM Methionine -0.2 1.5   -0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.9   0.3  
facs on lipid accumulation Sorted High BODIPY Gate 0.2 1.0   0.2  
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 1.1   0.3  
auxotrophy YNB Glucose -0.2 1.8   -0.1  
auxotrophy Dropout Complete -0.2 2.3   -0.0  
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