Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2182: 10550 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 282735 to 284065 10550 mRNA_2183: 10551 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 284423 to 286019 10551 mRNA_2184: 10552 - Hypothetical Protein, at 286236 to 287917 10552 mRNA_2185: 10553 - HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879, at 288686 to 288844 10553 mRNA_2186: 10554 - K06316 RFT1 oligosaccharide translocation protein RFT1, at 289914 to 291585 10554
Group Condition mRNA_2182 mRNA_2183 mRNA_2184 mRNA_2185 mRNA_2186
10550
10551
10552
10553
10554
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.3 -0.1 -0.6  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.3 -0.1 -1.0  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 0.0 -0.1 -0.5  
ypd buoyancy 40 hrs High Buoyancy -0.1 0.3 -0.4 -0.8  
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 -0.6 0.3  
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.0 -0.3 -0.4  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 0.2 0.3 -0.8  
growth on ricinoleic acid YNB Glucose -0.5 0.2 0.1 -0.3  
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.3 -0.2 -0.8  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.5 0.2 -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 0.0 0.1 -0.4  
growth on oleic acid YNB Oleic Acid -0.1 -0.1 0.0 0.6  
auxotrophy YNB Glucose 75mM Methionine -0.8 0.2 -0.2 1.5  
growth on oleic acid YNB Glucose 0.2 -0.1 -0.1 0.8  
auxotrophy YNB Glucose 75mM Arginine -0.6 0.4 -0.4 1.7  
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.0 0.2 1.0  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.3 0.1 0.9  
growth on ypd YPD 0.6 0.1 0.1 0.8  
auxotrophy YNB Glucose -0.5 0.4 -0.2 1.8  
auxotrophy Dropout Complete -0.6 0.1 -0.2 2.3  
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.5 0.0 1.1  
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