Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2179: 10547 - K06681 LTE1 Gdp/GTP exchange factor required for growth at low temperatures, at 268224 to 273308 10547 mRNA_2180: 10548 - KOG0166 Karyopherin (importin) alpha, at 273943 to 276215 10548 mRNA_2181: 10549 - K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2, at 278274 to 281386 10549 mRNA_2182: 10550 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 282735 to 284065 10550 mRNA_2183: 10551 - K00059 fabG 3-oxoacyl-[acyl-carrier protein] reductase, at 284423 to 286019 10551
Group Condition mRNA_2179 mRNA_2180 mRNA_2181 mRNA_2182 mRNA_2183
10547
10548
10549
10550
10551
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.1 -0.3 -0.6 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 -0.2 0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 0.2 -0.3 -0.8 0.2
growth on ricinoleic acid YNB Glucose 0.3 -0.2 -0.4 -0.5 0.2
auxotrophy Dropout Complete -0.1 0.1 -0.1 -0.6 0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.2 -0.1 -0.1
growth on oleic acid YNB Glucose -0.0 -0.2 -0.4 0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 0.0 -0.1 -0.6 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.1 -0.3 -0.5 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.1 -0.3 -0.4 0.2
auxotrophy YNB Glucose -0.2 0.2 -0.1 -0.5 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.0 0.3 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.4 -0.1 -0.1 0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 0.3 -0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.1 -0.3 0.6 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.1 0.2 0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.0 0.1 0.5 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.0 0.5 0.1 0.0
growth on ypd YPD 0.1 0.5 -0.2 0.6 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.4 0.2 0.2 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.5 0.0 0.1 0.5
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