Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2170: 10538 - K20294 COG7 conserved oligomeric Golgi complex subunit 7, at 240753 to 243794 10538 mRNA_2171: 10539 - K06877 K06877 DEAD/DEAH box helicase domain-containing protein, at 244214 to 249218 10539 mRNA_2172: 10540 - K00968 PCYT1 choline-phosphate cytidylyltransferase, at 249604 to 252159 10540 mRNA_2173: 10541 - K03950 NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6, at 252684 to 253574 10541 mRNA_2174: 10542 - K14009 BCAP31, BAP31 B-cell receptor-associated protein 31, at 254027 to 255180 10542
Group Condition mRNA_2170 mRNA_2171 mRNA_2172 mRNA_2173 mRNA_2174
10538
10539
10540
10541
10542
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 0.1 0.3 -2.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2 0.2 -2.0 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.1 0.3 -1.9 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.2 0.3 -1.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1 0.1 -1.2 -0.0
growth on ricinoleic acid YNB Glucose 0.3 -0.1 0.4 -1.4 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.5 -0.1 0.3 -1.5 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 0.3 -1.1 0.2
auxotrophy Dropout Complete 0.4 -0.2 0.4 -1.3 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 0.5 -0.3 -0.1
growth on ypd YPD 0.1 -0.1 -0.2 0.0 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.1 0.8 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.1 0.4 -1.0 0.0
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.2 0.4 -0.4 -0.1
growth on oleic acid YNB Glucose 0.3 -0.2 0.4 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 -0.0 -0.4 -0.3 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8 -0.0 0.6 -1.2 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 -0.1 0.5 -0.5 0.1
auxotrophy YNB Glucose 0.5 -0.2 0.7 -0.7 0.1
growth on oleic acid YNB Oleic Acid 0.4 -0.3 0.4 0.8 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 1.0 1.1 -0.0
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