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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2146: 10514 - K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1, at 185762 to 187254
10514
mRNA_2147: 10515 - K01719 hemD, UROS uroporphyrinogen-III synthase, at 187353 to 188300
10515
mRNA_2148: 10516 - KOG2490 Predicted membrane protein, at 188421 to 191027
10516
mRNA_2149: 10517 - K12948 SPCS3, SPC3 signal peptidase complex subunit 3, at 191152 to 191850
10517
mRNA_2150: 10518 - Hypothetical Protein, at 192227 to 192680
10518
Group
Condition
mRNA_2146
mRNA_2147
mRNA_2148
mRNA_2149
mRNA_2150
10514
10515
10516
10517
10518
auxotrophy
YNB Glucose
-0.7
-0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.7
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-1.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.9
auxotrophy
Dropout Complete
-0.2
-0.9
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.6
ypd buoyancy
40 hrs High Buoyancy
-0.8
-0.0
growth on ypd
YPD
0.1
-0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.3
growth on ricinoleic acid
YNB Glucose
-0.6
0.1
growth on oleic acid
YNB Glucose
-0.6
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.4
0.4
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.7
0.9
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