Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180912 to 181824 10511 mRNA_2144: 10512 - Hypothetical Protein, at 182114 to 183256 10512 mRNA_2145: 10513 - HMMPfam-Protein of unknown function DUF89-PF01937,SUPERFAMILY--SSF111321, at 183733 to 185513 10513 mRNA_2146: 10514 - K15100 SLC25A1, CTP solute carrier family 25 (mitochondrial citrate transporter), member 1, at 185762 to 187254 10514 mRNA_2147: 10515 - K01719 hemD, UROS uroporphyrinogen-III synthase, at 187353 to 188300 10515
Group Condition mRNA_2143 mRNA_2144 mRNA_2145 mRNA_2146 mRNA_2147
10511
10512
10513
10514
10515
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 -0.1 -1.7  
growth on ricinoleic acid YNB Glucose -0.3 -0.2 0.3 -0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.0 0.0 -0.8  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 0.4 -0.7  
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 0.1 -0.8  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.1 0.1 -0.7  
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.2 0.3 -1.1  
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 -0.0 -0.3  
auxotrophy YNB Glucose -0.0 0.0 0.4 -0.7  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.1 -0.0 -0.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.0 0.1 -0.3  
auxotrophy Dropout Complete -0.2 -0.2 0.3 -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.4 0.1 -0.9  
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 0.2 -0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.1 0.0 -0.2  
growth on oleic acid YNB Glucose 0.0 0.1 0.3 -0.6  
growth on ypd YPD -0.3 0.2 0.0 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.2 0.2 -0.7  
auxotrophy YNB Glucose 75mM Arginine 0.0 0.1 0.3 -0.5  
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 0.3 -0.4  
growth on oleic acid YNB Oleic Acid 0.1 0.3 0.4 0.1  
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