Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2141: 10509 - SUPERFAMILY--SSF52047, at 175857 to 177524 10509 mRNA_2142: 10510 - Hypothetical Protein, at 179044 to 180564 10510 mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180912 to 181824 10511 mRNA_2144: 10512 - Hypothetical Protein, at 182114 to 183256 10512 mRNA_2145: 10513 - HMMPfam-Protein of unknown function DUF89-PF01937,SUPERFAMILY--SSF111321, at 183733 to 185513 10513
Group Condition mRNA_2141 mRNA_2142 mRNA_2143 mRNA_2144 mRNA_2145
10509
10510
10511
10512
10513
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 -0.0 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.4 -0.1 0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 0.1 -0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.1 0.2 -0.3 -0.2 0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.1 -0.1 0.2
growth on oleic acid YNB Glucose -0.2 -0.3 0.0 0.1 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.1 -0.3 -0.2 0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.1 -0.2 0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.2 -0.0 0.0 0.0
auxotrophy Dropout Complete 0.2 0.1 -0.2 -0.2 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.3 0.1 0.1 0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.2 -0.2 0.0 0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 0.0 0.1 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.2 0.1 -0.1 0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.1 0.1 0.3 0.4
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2 0.1 -0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.4 0.2 0.4 0.1
growth on ypd YPD 0.7 0.2 -0.3 0.2 0.0
auxotrophy YNB Glucose 0.3 0.1 -0.0 0.0 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.8 -0.2 0.3 0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.3 0.2 0.2 0.3
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