Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2140: 10508 - HMMPfam-F-box domain-PF00646,HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF48350,SUPERFAMILY--SSF81383, at 162925 to 174925 10508 mRNA_2141: 10509 - SUPERFAMILY--SSF52047, at 175857 to 177524 10509 mRNA_2142: 10510 - Hypothetical Protein, at 179044 to 180564 10510 mRNA_2143: 10511 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 180912 to 181824 10511 mRNA_2144: 10512 - Hypothetical Protein, at 182114 to 183256 10512
Group Condition mRNA_2140 mRNA_2141 mRNA_2142 mRNA_2143 mRNA_2144
10508
10509
10510
10511
10512
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 -0.2 -0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 0.2 -0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 0.1 -0.3 -0.2
growth on oleic acid YNB Glucose -0.1 -0.2 -0.3 0.0 0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.1 0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 -0.3 0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.1 -0.4 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 0.0 0.1
auxotrophy Dropout Complete -0.0 0.2 0.1 -0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.3 -0.1 0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.2 -0.2 -0.0 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.0 0.1 -0.2 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.0 0.2 -0.2 0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1 0.2 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.4 -0.2 0.1 -0.1
auxotrophy YNB Glucose -0.0 0.3 0.1 -0.0 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.4 -0.4 0.2 0.4
growth on ypd YPD 0.1 0.7 0.2 -0.3 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.3 0.3 0.2 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.8 -0.2 0.3 0.2
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