Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2133: 10501 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,ProSiteProfiles-Zinc finger RanBP2 type profile.-PS50199,SMART-Zinc finger domain-SM00547,SUPERFAMILY--SSF90209, at 146345 to 148532 10501 mRNA_2134: 10502 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 148859 to 150709 10502 mRNA_2135: 10503 - KOG2922 Uncharacterized conserved protein, at 150841 to 152742 10503 mRNA_2136: 10504 - K01613 psd, PISD phosphatidylserine decarboxylase, at 153030 to 154707 10504 mRNA_2137: 10505 - Hypothetical Protein, at 155364 to 157707 10505
Group Condition mRNA_2133 mRNA_2134 mRNA_2135 mRNA_2136 mRNA_2137
10501
10502
10503
10504
10505
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.6 0.0 0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.1 0.1 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.6 0.3 0.2 0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.6 0.1 0.3 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.2 0.1 0.0 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.2 -0.4 -0.1 0.5
growth on ypd YPD 0.2 0.0 0.3 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.4 0.1 -0.0 0.2
auxotrophy Dropout Complete -0.1 0.2 0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose 0.4 -0.3 0.1 -0.5 0.3
growth on oleic acid YNB Glucose 0.7 -0.7 0.2 -0.0 -0.1
auxotrophy YNB Glucose -0.3 0.5 0.4 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.4 0.1 -0.1 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.2 0.1 -0.2 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.2 -0.0 0.1 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.3 0.4 0.0 -0.5
growth on oleic acid YNB Oleic Acid 0.5 -0.4 0.2 0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.1 0.1 0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 -0.4 0.2 -0.0 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.4 0.4 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.6 0.3 -0.1 0.7
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