Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2130: 10498 - Hypothetical Protein, at 138636 to 139652 10498 mRNA_2131: 10499 - K09580 PDIA1, P4HB protein disulfide-isomerase A1, at 141323 to 143619 10499 mRNA_2132: 10500 - Hypothetical Protein, at 144026 to 145888 10500 mRNA_2133: 10501 - ProSitePatterns-Zinc finger RanBP2-type signature.-PS01358,ProSiteProfiles-Zinc finger RanBP2 type profile.-PS50199,SMART-Zinc finger domain-SM00547,SUPERFAMILY--SSF90209, at 146345 to 148532 10501 mRNA_2134: 10502 - K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5, at 148859 to 150709 10502
Group Condition mRNA_2130 mRNA_2131 mRNA_2132 mRNA_2133 mRNA_2134
10498
10499
10500
10501
10502
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -3.6 -0.8 -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -2.2 -0.3 0.3 0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 -0.1 -0.8 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -1.5 0.0 0.4 0.6
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0 0.2 -0.5 -0.2
growth on ypd YPD -0.3 0.2 -0.1 0.2 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 1.5 0.0 -1.6 0.3
growth on oleic acid YNB Glucose -0.1 0.3 -0.1 0.7 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.2 0.6 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.5 0.5 -0.1 -0.6 0.1
auxotrophy YNB Glucose 75mM Arginine 0.6 0.7 -0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.9 -0.5 0.2 0.4
auxotrophy Dropout Complete 0.5 0.8 -0.5 -0.1 0.2
growth on oleic acid YNB Oleic Acid 0.3 0.9 -0.3 0.5 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 0.5 -0.8 0.4 0.3
auxotrophy YNB Glucose -0.1 1.2 -0.0 -0.3 0.5
growth on ricinoleic acid YNB Glucose 0.4 0.8 0.0 0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 1.7 -0.7 0.6 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.3 1.6 0.3 -0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.9 1.9 -0.1 0.6 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.7 2.1 0.3 0.5 -0.4
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