Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2119: 10487 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 117592 to 119082 10487 mRNA_2120: 10488 - Hypothetical Protein, at 119780 to 121101 10488 mRNA_2121: 10489 - K17991 PXG peroxygenase, at 121585 to 123428 10489 mRNA_2122: 10490 - K00103 GULO L-gulonolactone oxidase, at 124559 to 126866 10490 mRNA_2123: 10491 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 127215 to 128574 10491
Group Condition mRNA_2119 mRNA_2120 mRNA_2121 mRNA_2122 mRNA_2123
10487
10488
10489
10490
10491
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.1 -0.2 -0.7 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.2 -0.3 -0.8 -0.3
growth on oleic acid YNB Oleic Acid -0.0 0.0 -0.4 0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.2 -0.4 -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.0 0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.0 -0.1 -0.6 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.2 -0.1 -0.4 0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.1 -0.2 0.2 -0.4
growth on oleic acid YNB Glucose 0.3 -0.1 -0.3 -0.1 0.2
growth on ricinoleic acid YNB Glucose 0.3 -0.1 -0.3 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1 -0.3 0.5 0.1
auxotrophy YNB Glucose 75mM Methionine 0.3 0.1 -0.2 0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 0.3 -0.2 0.2
auxotrophy Dropout Complete 0.2 -0.0 0.2 0.4 -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.0 0.0 -0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.0 0.2 -0.1 0.1
auxotrophy YNB Glucose 0.1 -0.1 -0.1 0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.0 -0.2 0.1 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 0.1 -0.3 -0.1 0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 0.2 -0.1 -0.2 0.2
growth on ypd YPD 0.3 -0.0 -0.1 0.0 0.9
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