Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2118: 10486 - KOG0254 Predicted transporter (major facilitator superfamily), at 114569 to 117029 10486 mRNA_2119: 10487 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 117592 to 119082 10487 mRNA_2120: 10488 - Hypothetical Protein, at 119780 to 121101 10488 mRNA_2121: 10489 - K17991 PXG peroxygenase, at 121585 to 123428 10489 mRNA_2122: 10490 - K00103 GULO L-gulonolactone oxidase, at 124559 to 126866 10490
Group Condition mRNA_2118 mRNA_2119 mRNA_2120 mRNA_2121 mRNA_2122
10486
10487
10488
10489
10490
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 0.1 -0.1 -0.2 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.3 -0.2 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.1 0.2 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.2 -0.0 -0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.3 0.2 -0.3 -0.8
growth on oleic acid YNB Glucose -0.1 0.3 -0.1 -0.3 -0.1
growth on oleic acid YNB Oleic Acid 0.0 -0.0 0.0 -0.4 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.0 0.0 0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 0.1 -0.1 0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1 -0.1 -0.3 0.5
growth on ricinoleic acid YNB Glucose 0.1 0.3 -0.1 -0.3 0.1
growth on ypd YPD -0.1 0.3 -0.0 -0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.2 0.0 0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3 0.0 0.0 -0.1
auxotrophy YNB Glucose 0.1 0.1 -0.1 -0.1 0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.3 0.0 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 0.3 0.1 -0.2 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.3 0.1 -0.2 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.5 0.1 -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.7 0.2 -0.1 -0.2
auxotrophy Dropout Complete -0.0 0.2 -0.0 0.2 0.4
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