Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2113: 10481 - KOG0015 Regulator of arginine metabolism and related MADS box-containing transcription factors, at 103477 to 104004 10481 mRNA_2114: 10482 - K10768 ALKBH6 alkylated DNA repair protein alkB homolog 6, at 105978 to 107393 10482 mRNA_2115: 10483 - BLAST integral membrane protein [Stemphylium lycopersici], at 107556 to 109708 10483 mRNA_2116: 10484 - K01184 E3.2.1.15 polygalacturonase, at 110471 to 111882 10484 mRNA_2117: 10485 - Hypothetical Protein, at 112509 to 114471 10485
Group Condition mRNA_2113 mRNA_2114 mRNA_2115 mRNA_2116 mRNA_2117
10481
10482
10483
10484
10485
auxotrophy YNB Glucose -0.8 -0.1 0.1 -0.0 -0.7
growth on oleic acid YNB Glucose -1.1 0.1 0.1 0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 0.0 -0.0 -0.0 -0.4
growth on oleic acid YNB Oleic Acid -0.8 0.0 0.1 0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 -0.0 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.0 0.1 0.0 0.1
auxotrophy Dropout Complete -0.1 0.0 0.0 0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 0.0 0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.2 -0.0 0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.0 -0.0 0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.1 0.0 0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.2 0.1 0.2 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1 -0.2 0.1 0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.2 0.0 -0.1 0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.2 -0.1 0.1 0.2
growth on ricinoleic acid YNB Glucose 1.0 -0.2 -0.0 0.0 -0.4
growth on ypd YPD 0.1 -0.2 0.4 0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.0 -0.0 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.2 0.0 0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.9 0.3 -0.0 0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.7 0.3 -0.0 0.2 0.6
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