Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2109: 10477 - SUPERFAMILY--SSF56112, at 98028 to 98739 10477 mRNA_2110: 10478 - K10277 KDM8, JMJD5 lysine-specific demethylase 8, at 99075 to 100834 10478 mRNA_2111: 10479 - K10575 UBE2G1, UBC7 ubiquitin-conjugating enzyme E2 G1, at 101300 to 102530 10479 mRNA_2112: 10480 - Hypothetical Protein, at 102652 to 103100 10480 mRNA_2113: 10481 - KOG0015 Regulator of arginine metabolism and related MADS box-containing transcription factors, at 103477 to 104004 10481
Group Condition mRNA_2109 mRNA_2110 mRNA_2111 mRNA_2112 mRNA_2113
10477
10478
10479
10480
10481
auxotrophy Dropout Complete 0.0 -0.4 -2.1 0.1 -0.1
growth on oleic acid YNB Oleic Acid 0.1 -0.3 -1.4 -0.0 -0.8
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.8 -0.9 0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.2 -2.0 0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.6 -1.9 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.3 -0.9 -0.1 -0.1
auxotrophy YNB Glucose 0.0 -0.4 -0.3 0.2 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.1 -0.6 -0.2 0.3
growth on ypd YPD 0.2 0.4 -1.5 0.2 0.1
growth on oleic acid YNB Glucose 0.2 -0.1 0.5 0.1 -1.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.5 -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 -0.2 0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.2 -0.8 -0.1 0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.3 1.8 0.2 -0.7
growth on ricinoleic acid YNB Glucose 0.1 -0.4 0.6 -0.1 1.0
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.3 1.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.4 1.0 0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.4 1.1 -0.3 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.4 1.1 0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.3 1.2 0.5 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.4 1.6 0.4 0.9
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