Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2107: 10475 - K01918 panC pantoate--beta-alanine ligase, at 93856 to 95198 10475 mRNA_2108: 10476 - Hypothetical Protein, at 95420 to 96044 10476 mRNA_2109: 10477 - SUPERFAMILY--SSF56112, at 98028 to 98739 10477 mRNA_2110: 10478 - K10277 KDM8, JMJD5 lysine-specific demethylase 8, at 99075 to 100834 10478 mRNA_2111: 10479 - K10575 UBE2G1, UBC7 ubiquitin-conjugating enzyme E2 G1, at 101300 to 102530 10479
Group Condition mRNA_2107 mRNA_2108 mRNA_2109 mRNA_2110 mRNA_2111
10475
10476
10477
10478
10479
auxotrophy Dropout Complete -0.2 -0.4 0.0 -0.4 -2.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.5 -0.0 -0.3 -0.9
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 0.1 -0.8 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.2 0.1 -0.2 -2.0
growth on oleic acid YNB Oleic Acid 0.0 -0.1 0.1 -0.3 -1.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.5 0.1 -0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.3 0.0 0.6 -1.9
auxotrophy YNB Glucose -0.2 -0.3 0.0 -0.4 -0.3
growth on ricinoleic acid YNB Glucose -0.4 -0.7 0.1 -0.4 0.6
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 0.1 -0.1 -0.2
growth on ypd YPD 0.1 0.5 0.2 0.4 -1.5
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.1 0.1 0.2 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.1 -0.2 0.5 -0.1
growth on oleic acid YNB Glucose 0.2 0.2 0.2 -0.1 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.4 0.0 -0.3 1.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.3 0.1 0.4 1.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 -0.0 0.4 1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.4 0.2 -0.4 1.6
ypd buoyancy 40 hrs High Buoyancy -0.2 0.1 0.1 0.4 1.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.0 0.1 0.3 1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.0 -0.2 0.3 1.2
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