Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2083: 10451 - K06276 PDPK1 3-phosphoinositide dependent protein kinase-1, at 30266 to 34170 10451 mRNA_2084: 10452 - KOG0254 Predicted transporter (major facilitator superfamily), at 34690 to 37198 10452 mRNA_2085: 10453 - BLAST nucleotide-diphospho-sugar transferase [Sanghuangporu..., at 38392 to 39762 10453 mRNA_2086: 10454 - Hypothetical Protein, at 40220 to 41311 10454 mRNA_2087: 10455 - K19792 FET4 low-affinity ferrous iron transport protein, at 41484 to 43178 10455
Group Condition mRNA_2083 mRNA_2084 mRNA_2085 mRNA_2086 mRNA_2087
10451
10452
10453
10454
10455
facs on lipid accumulation Sorted High BODIPY Gate -2.1 -0.1 -0.1 -0.2 0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.4 -0.6 -0.1 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2 -0.2 0.1 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 0.1 0.2 0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.8 0.1 0.2 -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 0.1 0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2 0.2 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 0.3 0.1 -0.2 0.2
growth on ypd YPD 0.1 -0.0 0.1 0.1 -0.4
growth on oleic acid YNB Oleic Acid 0.3 0.0 -0.3 -0.0 0.1
auxotrophy YNB Glucose 75mM Methionine 0.0 0.2 0.2 0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1 -0.0 -0.0 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.5 -0.4 0.0 0.7
growth on oleic acid YNB Glucose 0.2 0.0 -0.1 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 0.0 -0.0 0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 0.0 0.5 0.1 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 1.0 -0.2 0.2 -0.1 -0.2
auxotrophy Dropout Complete 0.3 0.1 0.7 0.1 -0.4
auxotrophy YNB Glucose 0.2 0.1 0.5 0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 -0.1 0.1 0.0 0.4
growth on ricinoleic acid YNB Glucose 0.5 -0.3 0.4 0.0 0.3
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