Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9879 to 11848 10442 mRNA_2075: 10443 - ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300, at 13225 to 14495 10443 mRNA_2076: 10444 - K15073 UFO1 ubiquitin ligase complex F-box protein UFO1, at 14987 to 18739 10444 mRNA_2077: 10445 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 19100 to 20228 10445 mRNA_2078: 10446 - K10773 NTH endonuclease III, at 20466 to 22211 10446
Group Condition mRNA_2074 mRNA_2075 mRNA_2076 mRNA_2077 mRNA_2078
10442
10443
10444
10445
10446
auxotrophy YNB Glucose 0.1 0.0 -0.2 -0.0 -0.5
growth on ricinoleic acid YNB Glucose -0.1 0.1 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.1 -0.1 -0.2 0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 0.1 -0.2 0.0 -0.2
growth on ypd YPD -0.0 0.3 0.0 0.0 -0.4
growth on oleic acid YNB Oleic Acid 0.0 -0.1 0.0 0.3 -0.4
auxotrophy Dropout Complete 0.1 0.2 -0.1 0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.1 0.4 0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.0 -0.2 0.0 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.3 0.3 -0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.1 0.3 0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 0.1 0.0 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 0.3 -0.2 0.0 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.6 0.0 0.2 0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 0.2 0.3 0.1 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate 1.0 0.1 0.0 -0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.8 -0.1 -0.1 0.0 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.6 0.1 0.0 0.2 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.9 0.2 -0.0 0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.8 -0.0 0.4 0.3 -0.0
growth on oleic acid YNB Glucose 0.7 0.3 0.2 0.3 -0.1
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