Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2060: 10428 - K05824 LYS12 homoisocitrate dehydrogenase, at 855890 to 857453 10428 mRNA_2061: 10429 - HMMPfam-Protein of unknown function (DUF1640)-PF07798, at 857800 to 859276 10429 mRNA_2062: 10430 - K06210 NMNAT nicotinamide mononucleotide adenylyltransferase, at 860040 to 861424 10430 mRNA_2063: 10431 - SUPERFAMILY--SSF140860, at 861824 to 863143 10431 mRNA_2064: 10432 - KOG3839 Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans, at 863719 to 865833 10432
Group Condition mRNA_2060 mRNA_2061 mRNA_2062 mRNA_2063 mRNA_2064
10428
10429
10430
10431
10432
growth on ricinoleic acid YNB Glucose -2.8 -0.3   -0.7 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.8 -0.7   -0.8 0.2
auxotrophy YNB Glucose -2.5 -0.1   -0.1 -0.0
growth on oleic acid YNB Glucose -2.3 0.2   0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.4 0.7   -0.4 0.1
auxotrophy YNB Glucose 75mM Methionine -2.1 0.2   0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -2.1 0.1   -0.2 0.4
auxotrophy YNB Glucose 75mM Arginine -2.2 0.7   0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -1.1   0.2 0.3
facs on lipid accumulation Sorted No BODIPY Gate -1.3 -0.8   1.0 0.3
growth on oleic acid YNB Oleic Acid -1.5 0.3   0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.5   -1.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 0.1   -0.1 0.1
auxotrophy Dropout Complete -0.3 -0.1   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.3 0.4   0.4 0.2
growth on ypd YPD -0.2 -0.2   0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.2   -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 0.9   -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.5   0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.6   1.8 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7 -0.2   0.3 0.3
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