Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2057: 10425 - KOG3010 Methyltransferase, at 849514 to 850707 10425 mRNA_2058: 10426 - KOG1128 Uncharacterized conserved protein, contains TPR repeats, at 850790 to 853642 10426 mRNA_2059: 10427 - K13509 AGPAT1_2 lysophosphatidate acyltransferase, at 853881 to 854956 10427 mRNA_2060: 10428 - K05824 LYS12 homoisocitrate dehydrogenase, at 855890 to 857453 10428 mRNA_2061: 10429 - HMMPfam-Protein of unknown function (DUF1640)-PF07798, at 857800 to 859276 10429
Group Condition mRNA_2057 mRNA_2058 mRNA_2059 mRNA_2060 mRNA_2061
10425
10426
10427
10428
10429
auxotrophy YNB Glucose -0.4     -2.5 -0.1
growth on ricinoleic acid YNB Glucose 0.3     -2.8 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4     -1.3 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1     -1.8 -0.7
auxotrophy YNB Glucose 75mM Methionine -0.4     -2.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3     -0.8 -1.1
auxotrophy YNB Glucose 75mM Arginine -0.5     -2.2 0.7
growth on oleic acid YNB Glucose 0.2     -2.3 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3     -0.8 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1     -2.4 0.7
growth on oleic acid YNB Oleic Acid -0.2     -1.5 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.5     -2.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0     -1.3 0.4
growth on ypd YPD -0.4     -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2     -0.7 0.1
auxotrophy Dropout Complete -0.0     -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2     -0.2 0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2     -0.1 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.0     0.0 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3     0.7 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.4     -0.0 0.9
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