Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_2056: 10424 - K11667 INO80C, IES6 INO80 complex subunit C, at 848164 to 849134 10424 mRNA_2057: 10425 - KOG3010 Methyltransferase, at 849514 to 850707 10425 mRNA_2058: 10426 - KOG1128 Uncharacterized conserved protein, contains TPR repeats, at 850790 to 853642 10426 mRNA_2059: 10427 - K13509 AGPAT1_2 lysophosphatidate acyltransferase, at 853881 to 854956 10427 mRNA_2060: 10428 - K05824 LYS12 homoisocitrate dehydrogenase, at 855890 to 857453 10428
Group Condition mRNA_2056 mRNA_2057 mRNA_2058 mRNA_2059 mRNA_2060
10424
10425
10426
10427
10428
facs on lipid accumulation Sorted High BODIPY Gate -2.4 -0.3     -0.8
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.5     -2.2
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.4     -2.1
auxotrophy YNB Glucose 0.4 -0.4     -2.5
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 -0.3     -0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.7 -0.4     -1.3
growth on oleic acid YNB Glucose -0.2 0.2     -2.3
growth on ricinoleic acid YNB Glucose 0.4 0.3     -2.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.0     -1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8 0.1     -2.4
ypd buoyancy 40 hrs Median Buoyancy -0.9 -0.2     -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.9 0.1     -1.8
growth on ypd YPD -0.1 -0.4     -0.2
growth on oleic acid YNB Oleic Acid 1.1 -0.2     -1.5
auxotrophy Dropout Complete -0.0 -0.0     -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 -0.2     -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.8 0.2     -0.7
ypd buoyancy 40 hrs High Buoyancy -0.1 0.4     -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 2.0 0.5     -2.1
ypd buoyancy 40 hrs Low Buoyancy 0.6 0.0     0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.3     0.7
remove
mRNA_2056
plot		 remove
mRNA_2057
plot		 remove
mRNA_2058		 remove
mRNA_2059
plot		 remove
mRNA_2060
plot