Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2049: 10417 - K07565 NIP7 60S ribosome subunit biogenesis protein NIP7, at 832844 to 834374 10417 mRNA_2050: 10418 - K02725 PSMA1 20S proteasome subunit alpha 6, at 835073 to 836370 10418 mRNA_2051: 10419 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 836699 to 837795 10419 mRNA_2052: 10420 - KOG1399 Flavin-containing monooxygenase, at 838709 to 841749 10420 mRNA_2053: 10421 - KOG2450 Aldehyde dehydrogenase, at 842019 to 844467 10421
Group Condition mRNA_2049 mRNA_2050 mRNA_2051 mRNA_2052 mRNA_2053
10417
10418
10419
10420
10421
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.4 -0.1 -0.4
growth on oleic acid YNB Oleic Acid     -0.3 -0.4 -0.1
growth on ricinoleic acid YNB Glucose     -0.4 -0.1 -0.2
growth on oleic acid YNB Glucose     -0.5 0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid     -0.1 0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate     -0.1 -0.1 -0.0
growth on ypd YPD     -0.3 0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation     -0.4 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy     -0.1 0.0 -0.1
auxotrophy Dropout Complete     -0.3 0.2 0.1
auxotrophy YNB Glucose     -0.3 0.0 0.2
facs on lipid accumulation Sorted High BODIPY Gate     -0.2 0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy     -0.1 0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine     -0.3 0.4 -0.0
auxotrophy YNB Glucose 75mM Methionine     -0.2 0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate     -0.0 0.2 0.0
ypd buoyancy 40 hrs Low Buoyancy     0.1 0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.6 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.3 0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.8 -0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.5 0.2 0.2
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