Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2041: 10409 - HMMPfam-SAM domain (Sterile alpha motif)-PF00536,ProSiteProfiles-SAM domain profile.-PS50105,SUPERFAMILY--SSF47769, at 815256 to 815459 10409 mRNA_2042: 10410 - K11228 STE11 mitogen-activated protein kinase kinase kinase, at 818580 to 819652 10410 mRNA_2043: 10411 - Hypothetical Protein, at 820577 to 820768 10411 mRNA_2044: 10412 - HMMPfam-Domain of unknown function (DUF1793)-PF08760,SUPERFAMILY--SSF48208, at 821249 to 824656 10412 mRNA_2045: 10413 - Hypothetical Protein, at 824885 to 825949 10413
Group Condition mRNA_2041 mRNA_2042 mRNA_2043 mRNA_2044 mRNA_2045
10409
10410
10411
10412
10413
facs on lipid accumulation Sorted Low BODIPY Gate       -0.5 -0.9
facs on lipid accumulation Sorted High BODIPY Gate       -0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy       -0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate       -0.2 0.0
growth on oleic acid YNB Oleic Acid       0.1 -0.2
auxotrophy Dropout Complete       0.2 -0.3
growth on oleic acid YNB Glucose       0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine       -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy       -0.3 0.3
growth on ricinoleic acid YNB Glucose       0.2 -0.1
auxotrophy YNB Glucose       0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy       0.2 0.1
ypd buoyancy 40 hrs No Buoyancy Separation       -0.1 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid       0.4 0.3
growth on ypd YPD       0.1 0.5
auxotrophy YNB Glucose 75mM Methionine       0.1 0.5
growth on ricinoleic acid YNB Ricinoleic Acid       0.6 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy       0.8 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation       0.7 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy       0.5 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy       0.6 0.3
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