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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_2041: 10409 - HMMPfam-SAM domain (Sterile alpha motif)-PF00536,ProSiteProfiles-SAM domain profile.-PS50105,SUPERFAMILY--SSF47769, at 815256 to 815459
10409
mRNA_2042: 10410 - K11228 STE11 mitogen-activated protein kinase kinase kinase, at 818580 to 819652
10410
mRNA_2043: 10411 - Hypothetical Protein, at 820577 to 820768
10411
mRNA_2044: 10412 - HMMPfam-Domain of unknown function (DUF1793)-PF08760,SUPERFAMILY--SSF48208, at 821249 to 824656
10412
mRNA_2045: 10413 - Hypothetical Protein, at 824885 to 825949
10413
Group
Condition
mRNA_2041
mRNA_2042
mRNA_2043
mRNA_2044
mRNA_2045
10409
10410
10411
10412
10413
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.0
growth on oleic acid
YNB Oleic Acid
0.1
-0.2
auxotrophy
Dropout Complete
0.2
-0.3
growth on oleic acid
YNB Glucose
0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.3
0.3
growth on ricinoleic acid
YNB Glucose
0.2
-0.1
auxotrophy
YNB Glucose
0.0
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.3
growth on ypd
YPD
0.1
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.8
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.7
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
0.3
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