Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2036: 10404 - HMMPfam-Alpha and gamma adaptin binding protein p34-PF10199, at 804134 to 805617 10404 mRNA_2037: 10405 - Hypothetical Protein, at 806389 to 807325 10405 mRNA_2038: 10406 - Hypothetical Protein, at 807338 to 808315 10406 mRNA_2039: 10407 - KOG2895 Uncharacterized conserved protein, at 808552 to 810897 10407 mRNA_2040: 10408 - K11729 ACAD10 acyl-CoA dehydrogenase family member 10, at 811231 to 813728 10408
Group Condition mRNA_2036 mRNA_2037 mRNA_2038 mRNA_2039 mRNA_2040
10404
10405
10406
10407
10408
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.0 -0.8 -0.4 -2.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 0.3 -0.5 0.2 -2.3
ypd buoyancy 40 hrs High Buoyancy -1.4 -0.1 -0.3 0.0 0.0
growth on oleic acid YNB Oleic Acid -0.0 -0.3 -0.7 0.1 -0.7
auxotrophy Dropout Complete -1.3 -0.3 -0.4 0.4 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.4 -0.1 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.6 -0.2 -0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -0.3 -0.0 -0.2 -0.1
growth on oleic acid YNB Glucose -0.3 -0.3 -0.6 0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.6 0.3 -0.4 0.1 -0.3
growth on ypd YPD -0.0 -0.4 -0.3 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.4 -0.1 -0.5 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 0.1 -0.5 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1 -0.2 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.5 0.0 -0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.4 -0.3 0.1 0.0
auxotrophy YNB Glucose 0.0 -0.1 0.0 0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.1 0.4 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.3 0.2 -0.8 0.7
growth on ricinoleic acid YNB Glucose 0.8 0.0 -0.7 0.3 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 -0.2 0.1 0.1 0.0
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