Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2029: 10397 - K07088 K07088 uncharacterized protein, at 784732 to 786233 10397 mRNA_2030: 10398 - KOG2260 Cell division cycle 37 protein, CDC37, at 786522 to 787329 10398 mRNA_2031: 10399 - BLAST TPR-like protein [Auricularia subglabra TFB-10046..., at 792632 to 792952 10399 mRNA_2032: 10400 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 794820 to 796212 10400 mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796887 to 798543 10401
Group Condition mRNA_2029 mRNA_2030 mRNA_2031 mRNA_2032 mRNA_2033
10397
10398
10399
10400
10401
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.4 0.2 -1.1 -1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.4 0.2 -1.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.2 0.1 -0.3 -0.7
auxotrophy YNB Glucose -0.3 -0.1 0.2 0.3 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 0.1 -0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 0.2 -0.1 -0.2
auxotrophy Dropout Complete -0.4 -0.1 0.3 -0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 0.2 0.3 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.3 -0.1 0.5 -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.0 0.3 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.1 -0.0 0.1 -0.4
growth on ypd YPD -0.1 0.4 -0.1 -0.2 -0.0
growth on oleic acid YNB Oleic Acid -0.4 0.1 0.1 0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.0 0.1 0.3 -0.3
growth on ricinoleic acid YNB Glucose -0.1 -0.1 0.0 0.7 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 -0.1 0.7 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 0.0 0.3 0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.1 0.1 0.0 -0.0
growth on oleic acid YNB Glucose -0.1 0.0 0.3 0.4 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.2 -0.1 0.9 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.2 0.2 0.5 -0.2
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