Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2024: 10392 - K15979 SND1 staphylococcal nuclease domain-containing protein 1, at 770180 to 773514 10392 mRNA_2025: 10393 - SUPERFAMILY--SSF53474, at 773905 to 776623 10393 mRNA_2026: 10394 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 776938 to 779956 10394 mRNA_2027: 10395 - K07208 RHEB Ras homolog enriched in brain, at 780264 to 781182 10395 mRNA_2028: 10396 - HMMPfam-TENA/THI-4/PQQC family-PF03070,SUPERFAMILY--SSF48613, at 782141 to 783596 10396
Group Condition mRNA_2024 mRNA_2025 mRNA_2026 mRNA_2027 mRNA_2028
10392
10393
10394
10395
10396
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.9   -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.4 -0.3   -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.3 -0.1   -0.3
growth on oleic acid YNB Oleic Acid -0.2 -0.3 -0.2   -0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.4 -0.4   -0.3
auxotrophy YNB Glucose -0.3 -0.3 -0.1   -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.5 -0.3   -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 0.0   -0.3
growth on ricinoleic acid YNB Glucose -0.5 -0.2 -0.0   -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.1 -0.2   0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.0 -0.3   -0.2
auxotrophy Dropout Complete -0.2 -0.3 -0.1   -0.0
growth on oleic acid YNB Glucose -0.3 -0.2 -0.0   0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 0.0   -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.2 -0.3   -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.0 -0.5   0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.0 -0.1   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.3   0.5
growth on ypd YPD -0.0 0.2 -0.1   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.1 -0.0   0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.0 0.2   0.3
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