Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2022: 10390 - BLAST KLLA0F09339p [Kluyveromyces lactis], at 766628 to 767371 10390 mRNA_2023: 10391 - K04718 SPHK sphingosine kinase, at 767575 to 770006 10391 mRNA_2024: 10392 - K15979 SND1 staphylococcal nuclease domain-containing protein 1, at 770180 to 773514 10392 mRNA_2025: 10393 - SUPERFAMILY--SSF53474, at 773905 to 776623 10393 mRNA_2026: 10394 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 776938 to 779956 10394
Group Condition mRNA_2022 mRNA_2023 mRNA_2024 mRNA_2025 mRNA_2026
10390
10391
10392
10393
10394
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 0.1 -0.3 -0.3 -0.9
growth on oleic acid YNB Oleic Acid -0.3 -0.2 -0.2 -0.3 -0.2
auxotrophy Dropout Complete -0.3 -0.3 -0.2 -0.3 -0.1
growth on oleic acid YNB Glucose -0.1 -0.5 -0.3 -0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.3 -0.2 0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1 -0.4 -0.3 -0.1
auxotrophy YNB Glucose -0.1 -0.2 -0.3 -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.3 -0.6 -0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.4 0.2 0.0 -0.5
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.0 -0.2 -0.3 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 -0.2 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1 0.2 -0.5 -0.3
growth on ricinoleic acid YNB Glucose 0.3 0.2 -0.5 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.1 -0.2 -0.2 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.5 -0.6 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 0.4 0.2 -0.4 -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 0.3 -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.0 0.2 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.5 -0.1 0.1 -0.0
growth on ypd YPD 0.1 0.2 -0.0 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1 0.0 0.0 0.2
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