Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2011: 10379 - KOG2533 Permease of the major facilitator superfamily, at 737348 to 740033 10379 mRNA_2012: 10380 - K00681 ggt gamma-glutamyltranspeptidase / glutathione hydrolase, at 740635 to 742993 10380 mRNA_2013: 10381 - SUPERFAMILY--SSF49899, at 743258 to 744708 10381 mRNA_2014: 10382 - K20697 GNBP1 gram-negative bacteria-binding protein 1, at 745416 to 747550 10382 mRNA_2015: 10383 - Hypothetical Protein, at 747541 to 748131 10383
Group Condition mRNA_2011 mRNA_2012 mRNA_2013 mRNA_2014 mRNA_2015
10379
10380
10381
10382
10383
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.5 -0.2 0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.5 -0.2 0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.5 -0.1 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.3 -0.3 -0.2 -0.0
growth on oleic acid YNB Glucose 0.1 -0.6 -0.2 0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.3 -0.4 0.0 -0.1
auxotrophy Dropout Complete 0.0 -0.5 -0.3 0.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4 0.1 0.0 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 -0.2 0.1 0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.4 -0.1 0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 0.0 -0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 -0.2 0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0 -0.1 -0.1 0.1
growth on ypd YPD 0.2 -0.3 0.1 0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1 -0.1 0.2 -0.0
auxotrophy YNB Glucose 0.1 -0.2 0.0 0.3 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.4 -0.2 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 0.1 0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.2 -0.3 -0.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.1 -0.2 0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.4 -0.2 0.2 0.4
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