Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2009: 10377 - BLAST ankyrin [Cenococcum geophilum 1.58], at 733101 to 734076 10377 mRNA_2010: 10378 - KOG2533 Permease of the major facilitator superfamily, at 734428 to 736399 10378 mRNA_2011: 10379 - KOG2533 Permease of the major facilitator superfamily, at 737348 to 740033 10379 mRNA_2012: 10380 - K00681 ggt gamma-glutamyltranspeptidase / glutathione hydrolase, at 740635 to 742993 10380 mRNA_2013: 10381 - SUPERFAMILY--SSF49899, at 743258 to 744708 10381
Group Condition mRNA_2009 mRNA_2010 mRNA_2011 mRNA_2012 mRNA_2013
10377
10378
10379
10380
10381
growth on oleic acid YNB Oleic Acid 0.1 -0.3 -0.0 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.1 -0.1 -0.4 0.1
growth on oleic acid YNB Glucose 0.0 -0.2 0.1 -0.6 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.1 -0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 -0.3 0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.2 0.0 -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 1.0 -0.6 -0.2 -0.5 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 1.2 -1.0 -0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.2 -0.1 -0.2 -0.2
growth on ricinoleic acid YNB Glucose 0.5 0.0 -0.1 -0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.0 0.1 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.4 0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.2 -0.0 0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.4 -0.1 -0.2 0.0
auxotrophy Dropout Complete 1.1 0.1 0.0 -0.5 -0.3
growth on ypd YPD 0.6 -0.0 0.2 -0.3 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.2 0.2 0.4 -0.2
auxotrophy YNB Glucose 0.9 -0.0 0.1 -0.2 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.2 0.3 0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.7 0.1 0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine 1.2 0.1 -0.0 -0.0 0.1
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