Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2003: 10371 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 714669 to 717655 10371 mRNA_2004: 10372 - Hypothetical Protein, at 718267 to 719987 10372 mRNA_2005: 10373 - K08286 E2.7.11.- protein-serine/threonine kinase, at 720750 to 723688 10373 mRNA_2006: 10374 - K00380 cysJ sulfite reductase (NADPH) flavoprotein alpha-component, at 724216 to 728973 10374 mRNA_2007: 10375 - K15331 TRMT2B, TRM2 tRNA (uracil-5-)-methyltransferase, at 729212 to 731398 10375
Group Condition mRNA_2003 mRNA_2004 mRNA_2005 mRNA_2006 mRNA_2007
10371
10372
10373
10374
10375
facs on lipid accumulation Sorted Low BODIPY Gate -3.8 -0.1 0.8 -1.6 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.0 -1.0 0.2 -1.6 0.2
auxotrophy YNB Glucose 75mM Arginine 0.4 0.5 -1.0 -2.2 -0.3
growth on ricinoleic acid YNB Glucose 1.0 -0.2 -0.8 -2.0 -0.5
auxotrophy YNB Glucose 0.7 0.3 -1.1 -2.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.2 0.6 -1.0 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.5 -0.3 -0.6 0.2
growth on oleic acid YNB Glucose 0.5 0.3 -0.2 -1.6 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2 0.3 -1.1 0.2
auxotrophy Dropout Complete 0.3 0.2 -0.6 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.8 0.1 0.6 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 1.5 -0.3 -0.6 -0.8 -0.1
growth on ypd YPD -0.2 -0.0 0.1 -0.1 -0.2
growth on oleic acid YNB Oleic Acid 0.4 0.2 0.2 -0.9 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 1.6 -0.0 -0.9 -1.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.2 0.2 0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.1 0.6 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.7 0.4 -0.6 -0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.0 -0.7 -1.0 0.9 0.2
facs on lipid accumulation Sorted High BODIPY Gate 2.2 0.3 -0.2 -0.4 -0.8
ypd buoyancy 40 hrs Low Buoyancy 0.6 0.3 1.0 0.5 -0.0
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