Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_2002: 10370 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51971, at 712088 to 714509 10370 mRNA_2003: 10371 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 714669 to 717655 10371 mRNA_2004: 10372 - Hypothetical Protein, at 718267 to 719987 10372 mRNA_2005: 10373 - K08286 E2.7.11.- protein-serine/threonine kinase, at 720750 to 723688 10373 mRNA_2006: 10374 - K00380 cysJ sulfite reductase (NADPH) flavoprotein alpha-component, at 724216 to 728973 10374
Group Condition mRNA_2002 mRNA_2003 mRNA_2004 mRNA_2005 mRNA_2006
10370
10371
10372
10373
10374
facs on lipid accumulation Sorted Low BODIPY Gate   -3.8 -0.1 0.8 -1.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -2.0 -1.0 0.2 -1.6
auxotrophy YNB Glucose 75mM Arginine   0.4 0.5 -1.0 -2.2
auxotrophy YNB Glucose   0.7 0.3 -1.1 -2.2
growth on ricinoleic acid YNB Glucose   1.0 -0.2 -0.8 -2.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.5 -0.5 -0.3 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1 -0.2 0.3 -1.1
growth on oleic acid YNB Glucose   0.5 0.3 -0.2 -1.6
facs on lipid accumulation Sorted No BODIPY Gate   -0.3 -0.2 0.6 -1.0
auxotrophy Dropout Complete   0.3 0.2 -0.6 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   1.6 -0.0 -0.9 -1.0
ypd buoyancy 40 hrs High Buoyancy   -0.8 0.1 0.6 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid   1.5 -0.3 -0.6 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation   -0.5 -0.2 0.2 0.3
growth on ypd YPD   -0.2 -0.0 0.1 -0.1
growth on oleic acid YNB Oleic Acid   0.4 0.2 0.2 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy   1.0 -0.7 -1.0 0.9
auxotrophy YNB Glucose 75mM Methionine   0.7 0.4 -0.6 -0.2
ypd buoyancy 40 hrs Median Buoyancy   -0.2 0.1 0.6 -0.2
facs on lipid accumulation Sorted High BODIPY Gate   2.2 0.3 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy   0.6 0.3 1.0 0.5
remove
mRNA_2002
plot
remove
mRNA_2003
plot
remove
mRNA_2004
remove
mRNA_2005
plot
remove
mRNA_2006
plot