Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2001: 10369 - Hypothetical Protein, at 709037 to 710403 10369 mRNA_2002: 10370 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51971, at 712088 to 714509 10370 mRNA_2003: 10371 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 714669 to 717655 10371 mRNA_2004: 10372 - Hypothetical Protein, at 718267 to 719987 10372 mRNA_2005: 10373 - K08286 E2.7.11.- protein-serine/threonine kinase, at 720750 to 723688 10373
Group Condition mRNA_2001 mRNA_2002 mRNA_2003 mRNA_2004 mRNA_2005
10369
10370
10371
10372
10373
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5   -2.0 -1.0 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.5   -3.8 -0.1 0.8
ypd buoyancy 40 hrs No Buoyancy Separation -1.2   -0.5 -0.2 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4   -0.5 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7   1.0 -0.7 -1.0
growth on ricinoleic acid YNB Glucose -0.4   1.0 -0.2 -0.8
auxotrophy YNB Glucose -0.2   0.7 0.3 -1.1
ypd buoyancy 40 hrs High Buoyancy -0.3   -0.8 0.1 0.6
auxotrophy YNB Glucose 75mM Arginine -0.1   0.4 0.5 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   -0.1 -0.2 0.3
auxotrophy Dropout Complete 0.2   0.3 0.2 -0.6
growth on ypd YPD 0.2   -0.2 -0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2   -0.3 -0.2 0.6
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.2 0.1 0.6
auxotrophy YNB Glucose 75mM Methionine 0.2   0.7 0.4 -0.6
growth on oleic acid YNB Oleic Acid -0.0   0.4 0.2 0.2
growth on oleic acid YNB Glucose 0.2   0.5 0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4   1.6 -0.0 -0.9
growth on ricinoleic acid YNB Ricinoleic Acid 0.8   1.5 -0.3 -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.3   0.6 0.3 1.0
facs on lipid accumulation Sorted High BODIPY Gate 0.2   2.2 0.3 -0.2
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