Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_2000: 10368 - K09650 PARL, PSARL, PCP1 rhomboid-like protein, at 707641 to 708923 10368 mRNA_2001: 10369 - Hypothetical Protein, at 709037 to 710403 10369 mRNA_2002: 10370 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51971, at 712088 to 714509 10370 mRNA_2003: 10371 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 714669 to 717655 10371 mRNA_2004: 10372 - Hypothetical Protein, at 718267 to 719987 10372
Group Condition mRNA_2000 mRNA_2001 mRNA_2002 mRNA_2003 mRNA_2004
10368
10369
10370
10371
10372
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.5   -2.0 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.5   -3.8 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -1.2   -0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.4   -0.5 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3   -0.8 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.7   1.0 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2   -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.2   -0.2 0.1
growth on ypd YPD 0.0 0.2   -0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.2   -0.3 -0.2
growth on ricinoleic acid YNB Glucose 0.0 -0.4   1.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3   0.6 0.3
auxotrophy Dropout Complete -0.1 0.2   0.3 0.2
auxotrophy YNB Glucose 0.0 -0.2   0.7 0.3
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1   0.4 0.5
growth on oleic acid YNB Oleic Acid 0.3 -0.0   0.4 0.2
growth on oleic acid YNB Glucose -0.1 0.2   0.5 0.3
auxotrophy YNB Glucose 75mM Methionine 0.0 0.2   0.7 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.4   1.6 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.8   1.5 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.2   2.2 0.3
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