Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1995: 10363 - KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b, at 699690 to 700377 10363 mRNA_1996: 10364 - KOG0379 Kelch repeat-containing proteins, at 700597 to 701909 10364 mRNA_1997: 10365 - KOG0627 Heat shock transcription factor, at 702510 to 703691 10365 mRNA_1998: 10366 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 704179 to 706336 10366 mRNA_1999: 10367 - Hypothetical Protein, at 706788 to 707404 10367
Group Condition mRNA_1995 mRNA_1996 mRNA_1997 mRNA_1998 mRNA_1999
10363
10364
10365
10366
10367
auxotrophy Dropout Complete -0.1 -0.5   -0.4 -2.0
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.6   0.2 -2.0
growth on oleic acid YNB Oleic Acid -0.5 -0.5   -0.2 -0.8
growth on oleic acid YNB Glucose -0.6 -0.6   -0.0 -0.7
auxotrophy YNB Glucose 0.0 -0.8   0.1 -1.1
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.5   -0.3 -0.5
growth on ricinoleic acid YNB Glucose -0.3 -0.3   0.2 -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.0   -0.4 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1   0.1 -1.3
facs on lipid accumulation Sorted No BODIPY Gate 0.5 0.0   -0.2 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.3   -0.7 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7 0.1   0.0 -1.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 0.1   -0.0 -1.2
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.3   -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.8 0.1   -0.3 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.2   0.2 -1.0
ypd buoyancy 40 hrs Median Buoyancy -0.5 0.3   -0.0 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.0   -0.8 0.9
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.2   0.2 0.3
growth on ypd YPD 0.1 -0.7   0.1 0.7
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.7   0.0 0.3
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