Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1994: 10362 - K03235 EF3, TEF3 elongation factor 3, at 695063 to 698759 10362 mRNA_1995: 10363 - KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b, at 699690 to 700377 10363 mRNA_1996: 10364 - KOG0379 Kelch repeat-containing proteins, at 700597 to 701909 10364 mRNA_1997: 10365 - KOG0627 Heat shock transcription factor, at 702510 to 703691 10365 mRNA_1998: 10366 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 704179 to 706336 10366
Group Condition mRNA_1994 mRNA_1995 mRNA_1996 mRNA_1997 mRNA_1998
10362
10363
10364
10365
10366
growth on oleic acid YNB Oleic Acid   -0.5 -0.5   -0.2
growth on oleic acid YNB Glucose   -0.6 -0.6   -0.0
auxotrophy YNB Glucose 75mM Arginine   -0.3 -0.5   -0.3
auxotrophy Dropout Complete   -0.1 -0.5   -0.4
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 -0.3   -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.3 -0.0   -0.4
ypd buoyancy 40 hrs No Buoyancy Separation   0.1 0.0   -0.8
auxotrophy YNB Glucose   0.0 -0.8   0.1
growth on ypd YPD   0.1 -0.7   0.1
growth on ricinoleic acid YNB Glucose   -0.3 -0.3   0.2
ypd buoyancy 40 hrs High Buoyancy   0.2 -0.3   -0.3
auxotrophy YNB Glucose 75mM Methionine   0.2 -0.6   0.2
ypd buoyancy 40 hrs Median Buoyancy   -0.5 0.3   -0.0
growth on ricinoleic acid YNB Ricinoleic Acid   -0.0 -0.2   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1 -0.1   0.1
facs on lipid accumulation Sorted No BODIPY Gate   0.5 0.0   -0.2
ypd buoyancy 40 hrs Low Buoyancy   -0.1 0.7   0.0
facs on lipid accumulation Sorted High BODIPY Gate   0.8 0.1   -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.6 0.1   -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.4 0.2   0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.7 0.1   0.0
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