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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1990: 10358 - HMMPfam-PPR repeat-PF01535,HMMPfam-Pentatricopeptide repeat domain-PF13812,ProSiteProfiles-Pentatricopeptide (PPR) repeat profile.-PS51375,TIGRFAM-PPR pentatricopeptide repeat domain-TIGR00756, at 684324 to 686633
10358
mRNA_1991: 10359 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 687558 to 690393
10359
mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690779 to 693096
10360
mRNA_1993: 10361 - Hypothetical Protein, at 694051 to 694539
10361
mRNA_1994: 10362 - K03235 EF3, TEF3 elongation factor 3, at 695063 to 698759
10362
Group
Condition
mRNA_1990
mRNA_1991
mRNA_1992
mRNA_1993
mRNA_1994
10358
10359
10360
10361
10362
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.3
-1.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.3
-0.8
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.1
-0.7
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.4
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
0.5
-0.3
auxotrophy
YNB Glucose
-0.1
0.4
-0.3
growth on ricinoleic acid
YNB Glucose
0.1
0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.3
0.1
growth on oleic acid
YNB Glucose
0.3
0.0
-0.0
auxotrophy
Dropout Complete
-0.1
0.2
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.2
0.6
growth on oleic acid
YNB Oleic Acid
0.5
0.0
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.6
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.2
0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.3
0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.0
0.9
growth on ypd
YPD
0.1
-0.1
1.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
-0.0
0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.1
1.3
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