Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1988: 10356 - KOG1674 Cyclin, at 679258 to 681059 10356 mRNA_1989: 10357 - KOG0551 Hsp90 co-chaperone CNS1 (contains TPR repeats), at 682690 to 684207 10357 mRNA_1990: 10358 - HMMPfam-PPR repeat-PF01535,HMMPfam-Pentatricopeptide repeat domain-PF13812,ProSiteProfiles-Pentatricopeptide (PPR) repeat profile.-PS51375,TIGRFAM-PPR pentatricopeptide repeat domain-TIGR00756, at 684324 to 686633 10358 mRNA_1991: 10359 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 687558 to 690393 10359 mRNA_1992: 10360 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 690779 to 693096 10360
Group Condition mRNA_1988 mRNA_1989 mRNA_1990 mRNA_1991 mRNA_1992
10356
10357
10358
10359
10360
facs on lipid accumulation Sorted High BODIPY Gate -0.4     -0.6 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6     -0.0 -0.4
growth on ypd YPD -0.8     0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4     -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0     -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.4     -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3     0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3     -0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2     0.2 -0.2
growth on ricinoleic acid YNB Glucose -0.2     0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2     0.3 -0.2
auxotrophy Dropout Complete -0.1     -0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.0     -0.4 0.5
auxotrophy YNB Glucose 75mM Arginine -0.1     -0.1 0.3
auxotrophy YNB Glucose -0.1     -0.1 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0     0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1     0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.0     0.5 0.0
growth on oleic acid YNB Glucose 0.1     0.3 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0     0.6 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.0     0.0 0.6
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