Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1987: 10355 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 677107 to 679198 10355 mRNA_1988: 10356 - KOG1674 Cyclin, at 679258 to 681059 10356 mRNA_1989: 10357 - KOG0551 Hsp90 co-chaperone CNS1 (contains TPR repeats), at 682690 to 684207 10357 mRNA_1990: 10358 - HMMPfam-PPR repeat-PF01535,HMMPfam-Pentatricopeptide repeat domain-PF13812,ProSiteProfiles-Pentatricopeptide (PPR) repeat profile.-PS51375,TIGRFAM-PPR pentatricopeptide repeat domain-TIGR00756, at 684324 to 686633 10358 mRNA_1991: 10359 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 687558 to 690393 10359
Group Condition mRNA_1987 mRNA_1988 mRNA_1989 mRNA_1990 mRNA_1991
10355
10356
10357
10358
10359
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.6     -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.3     0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.4     -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.4     -0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.4     -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0     -0.2
growth on ypd YPD 0.4 -0.8     0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2     0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1     -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.6 -0.3     -0.2
auxotrophy YNB Glucose 0.3 -0.1     -0.1
auxotrophy Dropout Complete 0.3 -0.1     -0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.0     0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 0.0     -0.4
growth on ricinoleic acid YNB Glucose 0.3 -0.2     0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.2     0.3
growth on oleic acid YNB Oleic Acid 0.1 -0.0     0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.0     0.1
growth on oleic acid YNB Glucose 0.2 0.1     0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.1     0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.0     0.6
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