Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1986: 10354 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 673978 to 676416 10354 mRNA_1987: 10355 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 677107 to 679198 10355 mRNA_1988: 10356 - KOG1674 Cyclin, at 679258 to 681059 10356 mRNA_1989: 10357 - KOG0551 Hsp90 co-chaperone CNS1 (contains TPR repeats), at 682690 to 684207 10357 mRNA_1990: 10358 - HMMPfam-PPR repeat-PF01535,HMMPfam-Pentatricopeptide repeat domain-PF13812,ProSiteProfiles-Pentatricopeptide (PPR) repeat profile.-PS51375,TIGRFAM-PPR pentatricopeptide repeat domain-TIGR00756, at 684324 to 686633 10358
Group Condition mRNA_1986 mRNA_1987 mRNA_1988 mRNA_1989 mRNA_1990
10354
10355
10356
10357
10358
ypd buoyancy 40 hrs No Buoyancy Separation   -0.6 -0.3    
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.3 -0.6    
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2 -0.2    
ypd buoyancy 40 hrs Median Buoyancy   -0.0 -0.4    
growth on ypd YPD   0.4 -0.8    
ypd buoyancy 40 hrs Low Buoyancy   -0.2 -0.0    
ypd buoyancy 40 hrs High Buoyancy   0.2 -0.4    
growth on ricinoleic acid YNB Methylricinoleic Acid   0.2 -0.2    
auxotrophy YNB Glucose 75mM Arginine   0.1 -0.1    
growth on oleic acid YNB Oleic Acid   0.1 -0.0    
facs on lipid accumulation Sorted High BODIPY Gate   0.4 -0.4    
growth on ricinoleic acid YNB Glucose   0.3 -0.2    
auxotrophy YNB Glucose 75mM Methionine   0.1 -0.0    
auxotrophy YNB Glucose   0.3 -0.1    
auxotrophy Dropout Complete   0.3 -0.1    
growth on ricinoleic acid YNB Ricinoleic Acid   0.2 -0.0    
facs on lipid accumulation Sorted No BODIPY Gate   0.6 -0.3    
growth on oleic acid YNB Glucose   0.2 0.1    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.4 0.0    
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 0.1    
facs on lipid accumulation Sorted Low BODIPY Gate   0.7 0.0    
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