Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1984: 10352 - Hypothetical Protein, at 670630 to 671905 10352 mRNA_1985: 10353 - Hypothetical Protein, at 672578 to 672870 10353 mRNA_1986: 10354 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 673978 to 676416 10354 mRNA_1987: 10355 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 677107 to 679198 10355 mRNA_1988: 10356 - KOG1674 Cyclin, at 679258 to 681059 10356
Group Condition mRNA_1984 mRNA_1985 mRNA_1986 mRNA_1987 mRNA_1988
10352
10353
10354
10355
10356
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4     -0.3 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6     -0.2 -0.2
growth on ypd YPD -0.4     0.4 -0.8
ypd buoyancy 40 hrs Median Buoyancy -0.1     -0.0 -0.4
growth on oleic acid YNB Oleic Acid -0.4     0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5     0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1     0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0     -0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.7     -0.6 -0.3
auxotrophy Dropout Complete -0.3     0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0     0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.0     0.1 -0.1
auxotrophy YNB Glucose -0.1     0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1     0.2 -0.0
growth on ricinoleic acid YNB Glucose 0.1     0.3 -0.2
growth on oleic acid YNB Glucose 0.0     0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1     0.3 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0     0.4 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1     0.6 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.4     0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.4     0.7 0.0
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