Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1980: 10348 - KOG3436 60S ribosomal protein L35, at 663794 to 664282 10348 mRNA_1981: 10349 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 665074 to 666880 10349 mRNA_1982: 10350 - HMMPfam-Copper binding proteins, plastocyanin/azurin family-PF00127,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF49503, at 667248 to 669066 10350 mRNA_1983: 10351 - K07213 ATOX1, ATX1, copZ, golB copper chaperone, at 670002 to 670488 10351 mRNA_1984: 10352 - Hypothetical Protein, at 670630 to 671905 10352
Group Condition mRNA_1980 mRNA_1981 mRNA_1982 mRNA_1983 mRNA_1984
10348
10349
10350
10351
10352
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1 -0.1   -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.4 -0.1   -0.0
growth on ypd YPD   0.1 -0.1   -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.2 0.3   -0.4
facs on lipid accumulation Sorted High BODIPY Gate   -0.4 -0.3   0.4
auxotrophy Dropout Complete   -0.9 1.0   -0.3
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.2   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 0.0   0.0
growth on ricinoleic acid YNB Glucose   -0.1 0.0   0.1
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 -0.0   0.1
ypd buoyancy 40 hrs Median Buoyancy   0.2 -0.2   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1 0.4   -0.1
auxotrophy YNB Glucose 75mM Methionine   -0.3 1.0   -0.5
growth on ricinoleic acid YNB Ricinoleic Acid   0.1 0.3   -0.1
auxotrophy YNB Glucose 75mM Arginine   -0.6 0.9   0.0
growth on oleic acid YNB Oleic Acid   0.3 0.4   -0.4
growth on oleic acid YNB Glucose   0.2 0.3   0.0
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 0.2   0.4
auxotrophy YNB Glucose   -0.4 1.2   -0.1
ypd buoyancy 40 hrs Low Buoyancy   0.8 0.1   -0.0
ypd buoyancy 40 hrs No Buoyancy Separation   0.3 0.4   0.7
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