Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1972: 10340 - K20301 TRAPPC2, TRS20 trafficking protein particle complex subunit 2, at 645186 to 645812 10340 mRNA_1973: 10341 - KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton, at 646183 to 650027 10341 mRNA_1974: 10342 - KOG4067 Uncharacterized conserved protein, at 650254 to 651223 10342 mRNA_1975: 10343 - K12350 SMPD1, ASM sphingomyelin phosphodiesterase, at 651585 to 654888 10343 mRNA_1976: 10344 - Hypothetical Protein, at 655294 to 656131 10344
Group Condition mRNA_1972 mRNA_1973 mRNA_1974 mRNA_1975 mRNA_1976
10340
10341
10342
10343
10344
facs on lipid accumulation Sorted Low BODIPY Gate   0.4 0.3 -0.4 -2.6
growth on oleic acid YNB Glucose   -0.6 -0.3 0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate   0.1 0.2 -0.3 -1.1
ypd buoyancy 40 hrs No Buoyancy Separation   -0.1 0.2 -0.2 -0.9
growth on ypd YPD   -0.3 0.4 0.2 -0.8
growth on ricinoleic acid YNB Glucose   -0.6 -0.7 -0.0 0.7
growth on ricinoleic acid YNB Ricinoleic Acid   -1.1 -0.2 0.5 0.3
ypd buoyancy 40 hrs Low Buoyancy   0.1 -0.1 -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy   0.2 0.2 -0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy   0.2 0.2 -0.6 0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.7 -0.8 -0.0 0.0
growth on oleic acid YNB Oleic Acid   -0.0 -0.1 0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 -0.7 -0.3 0.9
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 -0.2 0.3 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.3 -0.2 -0.5 0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.1 -0.6 0.0 1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.2 -0.3 -0.3 0.9
auxotrophy Dropout Complete   0.2 0.2 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine   0.3 0.4 0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine   0.2 0.4 0.1 -0.0
auxotrophy YNB Glucose   0.2 0.5 0.2 0.4
remove
mRNA_1972
plot		 remove
mRNA_1973
plot		 remove
mRNA_1974		 remove
mRNA_1975
plot		 remove
mRNA_1976
plot