Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1969: 10337 - K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1, at 635638 to 637721 10337 mRNA_1970: 10338 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 638087 to 640268 10338 mRNA_1971: 10339 - K02429 fucP MFS transporter, FHS family, L-fucose permease, at 642692 to 644646 10339 mRNA_1972: 10340 - K20301 TRAPPC2, TRS20 trafficking protein particle complex subunit 2, at 645186 to 645812 10340 mRNA_1973: 10341 - KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton, at 646183 to 650027 10341
Group Condition mRNA_1969 mRNA_1970 mRNA_1971 mRNA_1972 mRNA_1973
10337
10338
10339
10340
10341
ypd buoyancy 40 hrs No Buoyancy Separation -1.9 -0.8 -0.5   -0.1
growth on ricinoleic acid YNB Glucose -0.2 0.2 -0.2   -0.6
growth on oleic acid YNB Glucose 0.3 -0.2 -0.3   -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 0.0 -0.5   0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.2 0.2 0.3   0.2
growth on ypd YPD -0.3 -0.1 0.3   -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.4 -0.5   -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.9 0.5 -0.4   -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.8 -0.2 -0.4   0.3
growth on oleic acid YNB Oleic Acid 0.9 -0.1 -0.1   -0.0
ypd buoyancy 40 hrs High Buoyancy 0.4 0.1 0.2   0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.4 0.5   0.1
ypd buoyancy 40 hrs Median Buoyancy 0.7 0.0 0.1   0.2
auxotrophy YNB Glucose 1.6 0.0 -0.6   0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.0 0.4   0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.2 0.5   -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.9 0.0 0.2   0.2
ypd buoyancy 40 hrs Low Buoyancy 0.9 0.2 0.4   0.1
auxotrophy YNB Glucose 75mM Arginine 1.4 0.2 0.1   0.3
auxotrophy Dropout Complete 2.0 0.2 -0.3   0.2
auxotrophy YNB Glucose 75mM Methionine 1.6 0.5 -0.0   0.2
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