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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1967: 10335 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 630264 to 633467
10335
mRNA_1968: 10336 - HMMPfam-Membrane bound O-acyl transferase family-PF13813, at 633859 to 635339
10336
mRNA_1969: 10337 - K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1, at 635638 to 637721
10337
mRNA_1970: 10338 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 638087 to 640268
10338
mRNA_1971: 10339 - K02429 fucP MFS transporter, FHS family, L-fucose permease, at 642692 to 644646
10339
Group
Condition
mRNA_1967
mRNA_1968
mRNA_1969
mRNA_1970
mRNA_1971
10335
10336
10337
10338
10339
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.0
-1.9
-0.8
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.6
-0.5
0.0
-0.5
growth on oleic acid
YNB Glucose
-0.2
-0.4
0.3
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
-0.2
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.5
-1.2
0.2
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
0.8
-0.2
-0.4
growth on ypd
YPD
0.2
0.2
-0.3
-0.1
0.3
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
0.9
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.2
0.3
0.4
-0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.6
0.9
0.0
0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.2
0.4
0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.2
-0.1
0.4
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.4
0.2
-0.0
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.3
0.7
0.0
0.1
auxotrophy
YNB Glucose
-0.1
0.2
1.6
0.0
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.4
0.9
0.5
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.2
0.9
0.2
0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.1
1.4
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.3
0.6
0.2
0.5
auxotrophy
Dropout Complete
-0.2
0.0
2.0
0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.3
1.6
0.5
-0.0
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