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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1965: 10333 - K11422 SETD1, SET1 histone-lysine N-methyltransferase SETD1, at 622721 to 626978
10333
mRNA_1966: 10334 - K09522 DNAJC2 DnaJ homolog subfamily C member 2, at 628186 to 629960
10334
mRNA_1967: 10335 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 630264 to 633467
10335
mRNA_1968: 10336 - HMMPfam-Membrane bound O-acyl transferase family-PF13813, at 633859 to 635339
10336
mRNA_1969: 10337 - K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1, at 635638 to 637721
10337
Group
Condition
mRNA_1965
mRNA_1966
mRNA_1967
mRNA_1968
mRNA_1969
10333
10334
10335
10336
10337
facs on lipid accumulation
Sorted Low BODIPY Gate
-3.1
-0.4
-0.6
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.6
-0.0
0.5
-1.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.7
-0.2
0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-2.0
-0.1
0.4
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.2
-0.0
-1.9
growth on ypd
YPD
-1.0
0.2
0.2
-0.3
growth on ricinoleic acid
YNB Glucose
0.2
-0.1
-0.3
-0.2
growth on oleic acid
YNB Glucose
0.4
-0.2
-0.4
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.6
0.1
0.2
0.9
ypd buoyancy
40 hrs High Buoyancy
0.3
0.2
-0.2
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
-0.1
-0.3
0.8
growth on oleic acid
YNB Oleic Acid
0.3
-0.1
-0.1
0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.2
0.3
0.6
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.1
0.3
0.7
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
0.1
1.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.1
0.1
0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.4
0.0
-0.6
0.9
auxotrophy
Dropout Complete
0.0
-0.2
0.0
2.0
auxotrophy
YNB Glucose
0.2
-0.1
0.2
1.6
auxotrophy
YNB Glucose 75mM Methionine
0.5
0.1
0.3
1.6
growth on ricinoleic acid
YNB Ricinoleic Acid
1.4
0.2
0.4
0.9
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