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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1961: 10329 - HMMPfam-CUE domain-PF02845,ProSiteProfiles-CUE domain profile.-PS51140, at 616368 to 617254
10329
mRNA_1962: 10330 - K00133 asd aspartate-semialdehyde dehydrogenase, at 617594 to 618818
10330
mRNA_1963: 10331 - K00767 nadC, QPRT nicotinate-nucleotide pyrophosphorylase (carboxylating), at 619421 to 620670
10331
mRNA_1964: 10332 - K01495 GCH1, folE GTP cyclohydrolase I, at 621166 to 622157
10332
mRNA_1965: 10333 - K11422 SETD1, SET1 histone-lysine N-methyltransferase SETD1, at 622721 to 626978
10333
Group
Condition
mRNA_1961
mRNA_1962
mRNA_1963
mRNA_1964
mRNA_1965
10329
10330
10331
10332
10333
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.7
-0.5
-3.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-1.9
-1.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
-0.2
-1.7
growth on oleic acid
YNB Oleic Acid
-2.4
-0.3
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.2
-1.4
1.4
growth on ypd
YPD
-0.4
-0.4
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.7
-0.2
-2.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-2.0
-0.2
1.1
growth on oleic acid
YNB Glucose
-0.7
-0.3
0.4
auxotrophy
Dropout Complete
-0.1
-0.4
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.6
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
-0.6
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.3
0.1
growth on ricinoleic acid
YNB Glucose
-0.3
0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.5
0.6
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.2
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.2
0.3
auxotrophy
YNB Glucose
0.3
0.1
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.6
0.5
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.3
1.4
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