Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1960: 10328 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 613593 to 615935 10328 mRNA_1961: 10329 - HMMPfam-CUE domain-PF02845,ProSiteProfiles-CUE domain profile.-PS51140, at 616368 to 617254 10329 mRNA_1962: 10330 - K00133 asd aspartate-semialdehyde dehydrogenase, at 617594 to 618818 10330 mRNA_1963: 10331 - K00767 nadC, QPRT nicotinate-nucleotide pyrophosphorylase (carboxylating), at 619421 to 620670 10331 mRNA_1964: 10332 - K01495 GCH1, folE GTP cyclohydrolase I, at 621166 to 622157 10332
Group Condition mRNA_1960 mRNA_1961 mRNA_1962 mRNA_1963 mRNA_1964
10328
10329
10330
10331
10332
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -2.2   -1.4  
growth on oleic acid YNB Oleic Acid -0.4 -2.4   -0.3  
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -2.7   -0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -2.0   -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.0   -1.9  
growth on oleic acid YNB Glucose -0.3 -0.7   -0.3  
growth on ypd YPD -0.4 -0.4   -0.4  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.9   -0.2  
auxotrophy Dropout Complete -0.1 -0.1   -0.4  
growth on ricinoleic acid YNB Glucose -0.3 -0.3   0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.2   -0.5  
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.2   -0.2  
ypd buoyancy 40 hrs High Buoyancy -0.2 0.2   -0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.3   -0.6  
auxotrophy YNB Glucose 75mM Arginine 0.1 0.1   -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.3   0.3  
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1   0.2  
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.3   0.1  
auxotrophy YNB Glucose -0.0 0.3   0.1  
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.7   -0.2  
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.6   0.5  
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