Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1955: 10323 - KOG0379 Kelch repeat-containing proteins, at 603461 to 605817 10323 mRNA_1956: 10324 - BLAST 40S ribosomal protein S1 [Exophiala sideris], at 606971 to 607614 10324 mRNA_1957: 10325 - K02984 RP-S3Ae, RPS3A small subunit ribosomal protein S3Ae, at 607981 to 609583 10325 mRNA_1958: 10326 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 610306 to 612524 10326 mRNA_1959: 10327 - Hypothetical Protein, at 613200 to 613373 10327
Group Condition mRNA_1955 mRNA_1956 mRNA_1957 mRNA_1958 mRNA_1959
10323
10324
10325
10326
10327
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -1.0   -0.2  
growth on oleic acid YNB Glucose -0.1 -0.1   -0.4  
auxotrophy Dropout Complete -0.1 -0.1   -0.4  
growth on oleic acid YNB Oleic Acid -0.2 -0.0   -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 0.5   -0.2  
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.3   -0.2  
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5   0.2  
auxotrophy YNB Glucose 0.2 -0.1   -0.5  
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.2   -0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 0.3   0.1  
growth on ypd YPD 0.3 -0.5   0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.4   0.0  
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.0   -0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.3   -0.0  
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0   0.1  
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1   -0.2  
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.4   -0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.4   -0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.2   0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.2   0.1  
growth on ricinoleic acid YNB Glucose 0.2 0.6   -0.0  
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