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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1942: 10310 - HMMPfam-PLD-like domain-PF13091,ProSiteProfiles-Phospholipase D phosphodiesterase active site profile.-PS50035,SMART-Phospholipase D. Active site motifs.-SM00155,SUPERFAMILY--SSF56024, at 567440 to 570897
10310
mRNA_1943: 10311 - Hypothetical Protein, at 571138 to 572203
10311
mRNA_1944: 10312 - BLAST Respiratory supercomplex factor 2, mitochondrial [Cla..., at 572594 to 573767
10312
mRNA_1945: 10313 - Hypothetical Protein, at 574351 to 575148
10313
mRNA_1946: 10314 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 575124 to 577080
10314
Group
Condition
mRNA_1942
mRNA_1943
mRNA_1944
mRNA_1945
mRNA_1946
10310
10311
10312
10313
10314
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-0.0
0.6
-3.0
-4.7
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
0.6
-1.2
-1.1
-1.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
-0.0
-0.3
-1.2
-2.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.0
0.3
-1.3
-1.8
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.3
0.3
-0.5
-1.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.2
0.1
-0.3
-0.9
growth on ypd
YPD
-0.5
-0.2
-0.4
0.2
0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.3
0.4
-0.4
-0.7
auxotrophy
YNB Glucose
0.1
-0.5
-0.3
0.3
0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.1
-0.2
0.3
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
0.1
0.6
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.3
0.0
0.4
0.5
growth on ricinoleic acid
YNB Glucose
-0.3
-0.4
-0.2
0.8
0.5
growth on oleic acid
YNB Oleic Acid
-0.5
-0.2
0.1
0.6
0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.0
0.1
0.6
0.7
auxotrophy
Dropout Complete
-0.1
-0.1
-0.2
0.5
1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.2
-0.2
1.7
0.9
growth on oleic acid
YNB Glucose
0.1
-0.1
0.3
0.6
1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.2
-0.5
1.4
1.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.7
0.1
-0.2
1.0
0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.1
0.2
1.6
1.2
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