Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1939: 10307 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 558580 to 560603 10307 mRNA_1940: 10308 - K00276 AOC3, AOC2, tynA primary-amine oxidase, at 561164 to 563777 10308 mRNA_1941: 10309 - KOG3798 Predicted Zn-dependent hydrolase (beta-lactamase superfamily), at 564207 to 567007 10309 mRNA_1942: 10310 - HMMPfam-PLD-like domain-PF13091,ProSiteProfiles-Phospholipase D phosphodiesterase active site profile.-PS50035,SMART-Phospholipase D. Active site motifs.-SM00155,SUPERFAMILY--SSF56024, at 567440 to 570897 10310 mRNA_1943: 10311 - Hypothetical Protein, at 571138 to 572203 10311
Group Condition mRNA_1939 mRNA_1940 mRNA_1941 mRNA_1942 mRNA_1943
10307
10308
10309
10310
10311
growth on ypd YPD -0.3 -0.2 -0.1 -0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 0.1 -0.5 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.3 -0.3 -0.6 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.5 0.5 -0.6 -0.0
growth on oleic acid YNB Oleic Acid -0.0 -0.0 -0.2 -0.5 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.3 -0.4 -0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1 -0.2 -0.3 -0.3
growth on oleic acid YNB Glucose -0.1 -0.0 -0.3 0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 0.0 -0.1 -0.8 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.5 -0.2 -1.0 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 0.2 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.1 -0.3 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.7 0.7 0.1
auxotrophy Dropout Complete 0.0 0.1 -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.1 0.3 0.4 -0.3 -0.4
auxotrophy YNB Glucose 0.1 0.0 0.1 0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 0.0 -0.1 0.3
ypd buoyancy 40 hrs High Buoyancy -0.4 0.1 0.3 -0.2 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.1 0.5 -0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2 0.4 -0.0 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 0.4 -0.0 0.2
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