Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1936: 10304 - K07424 CYP3A cytochrome P450, family 3, subfamily A, at 551220 to 553834 10304 mRNA_1937: 10305 - K18342 OTUD6 OTU domain-containing protein 6, at 554394 to 556031 10305 mRNA_1938: 10306 - HMMPfam-Amidohydrolase family-PF07969,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 556583 to 558262 10306 mRNA_1939: 10307 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 558580 to 560603 10307 mRNA_1940: 10308 - K00276 AOC3, AOC2, tynA primary-amine oxidase, at 561164 to 563777 10308
Group Condition mRNA_1936 mRNA_1937 mRNA_1938 mRNA_1939 mRNA_1940
10304
10305
10306
10307
10308
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -1.2 -0.1 -0.3 -0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -2.5 -0.3 0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -2.0 -0.1 0.4 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -2.2 -0.4 0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.0 -1.0 -0.2 -0.0 -0.0
growth on ypd YPD -0.3 -0.3 -0.1 -0.3 -0.2
auxotrophy Dropout Complete -0.4 -0.8 -0.2 0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -1.3 -0.0 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -1.8 0.6 -0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -1.9 0.6 0.1 0.3
growth on oleic acid YNB Glucose 0.1 -0.7 0.2 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.9 0.3 -0.2 0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 0.0 -0.1 -0.4 0.1
auxotrophy YNB Glucose 0.1 -0.9 0.2 0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.3 0.1 -0.1 -0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.9 0.7 -0.1 0.3
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 0.2 -0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.3 -0.0 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.4 0.1 0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 1.0 0.7 -0.3 -0.2 0.5
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